Papers
- Sousa, A., Magalhães, A., Gordo, I. (2012) Cost of antibiotic resistance and the geometry of adaptation.. Mol Biol Evol. 29(5):1417-28
- Duarte J, Carrié N, Oliveira VG, Almeida C, Agua-Doce A, Rodrigues L, Simas P, Mars LT, Graça L. (2012) T cell apoptosis and induction of Foxp3+ regulatory T cells underlie the therapeutic efficacy of CD4-blockade in experimental autoimmune encephalomyelitis. J Immunol 189:1680-1688
- Ahrens MB, Li JM, Orger MB, Robson DN, Schier AF, Engert F, Portugues R. (2012) Whole-brain neural dynamics during rapid motor adaptation in zebrafish. Nature 485(7399):471-7
- Xavier JM, Shahram F, Davatchi F, Rosa A, Crespo J, Abdollahi BS, Nadji A, Jesus G, Barcelos F, Patto JV, Shafiee NM, Ghaderibarim F, Oliveira SA. (2012) Association study of IL10 and IL23R-IL12RB2 in Iranian Behçet’s disease patients. Arthritis & Rheumatism 64:2761-2772
- Helena Manso, Tiago Krug, João Sobral, Isabel Albergaria, Gisela Gaspar, José M Ferro, Sofia A Oliveira, Astrid M Vicente (2012) Variants within the nitric oxide synthase 1 gene are associated with stroke susceptibility. Atherosclerosis 220(2):443-8
- Almeida SC, de Oliveira VL, Ventura S, Bofill M, Parkhouse RM. (2012) Neoplastic transformation of T lymphocytes through transgenic expression of a virus host modification protein. PLoS One 7(4):e34140
- Vaz R., Martins G.G., Thorsteinsdóttir S. & Rodrigues G. (2012) Fibronectin promotes migration, alignment and fusion in an in vitro myoblast cell mode. Cell and Tissue Research 348:569-578
- Tavares, A., Gonçalves, J. , Florindo, C., Tavares, A. and Soares, H. (2012) Mob1: defining cell polarity for proper cell division. J. Cell Sci 125:516-27
- Fesel, C. (2012) Coreferentiality: a new method for the hypothesis-based analysis of phenotypes characterized by multivariate data. PLoS ONE 7(3):e33990
- Gjini, E., Haydon, D., Barry, J., Cobbold, C. (2012) The impact of mutation and gene conversion on the local diversification of antigen genes in African Trypanosomes.. Mol Biol Evol. 29 (11):3321-3331
- Deries M., Gonçalves A.B.*, Vaz R.*, Martins G.G., Rodrigues G. & Thorsteinsdóttir S. (*equal contribution) (2012) Extracellular matrix remodelling accompanies axial muscle development and morphogenesis in the mouse. Developmental Dynamics 241:350–364
- Sehrawat S, Kirak O, Koenig PA, Isaacson MK, Marques S, Bozkurt G, Simas JP, Jaenisch R, Ploegh HL. (2012) CD8(+) T Cells from Mice Transnuclear for a TCR that Recognizes a Single H-2K(b)-Restricted MHV68 Epitope Derived from gB-ORF8 Help Control Infection. Cell Reports 1(5):461-71
- Faro, J. and OrGuil, M. (2012) How oligoclonal are germinal centers? A new method for estimating clonal diversity from immunohistological sections. BMC Bioinformatics (in press)
- Hudspeth K, Fogli M, Correia D, Mikulak J, Roberto A, Della Bella S, Silva Santos B* and Mavilio D* (*Equal contributions) (2012) Engagement of NKp30 on Vd1+ T-cells induces the production of CCL3, CCL4 and CCL5 and suppresses HIV-1 replication. Blood 119(17):4013-6
- Krug T, Gabriel JP, Taipa R, Fonseca BV, Domingues-Montanari S, Fernandez-Cadenas I, Manso H, Gouveia L, Sobral J, Albergaria I, Gaspar G, Jiménez-Conde J, Rabionet R, Ferro JM, Montaner J, Vicente AM, Silva MR, Matos I, Lopes G, Oliveira SA. (2012) Tetratricopeptide repeat domain 7B emerges as a novel risk factor for ischemic stroke through the convergence of several genome-wide approaches. Journal of Cerebral Blood Flow and Metabolism 32:1061-1072
- Anney R, Klei L, Pinto D, Almeida J, Bacchelli E, Baird G, Bolshakova N, Bölte S, Bolton PF, Bourgeron T, Brennan S, Brian J, Casey J, Conroy J, Correia C, Corsello C, Crawford EL, de Jonge M, Delorme R, Duketis E, Duque F, Estes A, Farrar P, Fernandez BA, Folstein SE, Fombonne E, Gilbert J, Gillberg C, Glessner JT, Green A, Green J, Guter SJ, Heron EA, Holt R, Howe JL, Hughes G, Hus V, Igliozzi R, Jacob S, Kenny GP, Kim C, Kolevzon A, Kustanovich V, Lajonchere CM, Lamb JA, Law-Smith M, Leboyer M, Le Couteur A, Leventhal BL, Liu XQ, Lombard F, Lord C, Lotspeich L, Lund SC, Magalhaes TR, Mantoulan C, McDougle CJ, Melhem NM, Merikangas A, Minshew NJ, Mirza GK, Munson J, Noakes C, Nygren G, Papanikolaou K, Pagnamenta AT, Parrini B, Paton T, Pickles A, Posey DJ, Poustka F, Ragoussis J, Regan R, Roberts W, Roeder K, Roge B, Rutter ML, Schlitt S, Shah N, Sheffield VC, Soorya L, Sousa I, Stoppioni V, Sykes N, Tancredi R, Thompson AP, Thomson S, Tryfon A, Tsiantis J, Van Engeland H, Vincent JB, Volkmar F, Vorstman J, Wallace S, Wing K, Wittemeyer K, Wood S, Zurawiecki D, Zwaigenbaum L, Bailey AJ, Battaglia A, Cantor RM, Coon H, Cuccaro ML, Dawson G, Ennis S, Freitag CM, Geschwind DH, Haines JL, Klauck SM, McMahon WM, Maestrini E, Miller J, Monaco AP, Nelson SF, Nurnberger JI Jr, Oliveira G, Parr JR, Pericak-Vance MA, Piven J, Schellenberg GD, Scherer SW, Vicente AM, Wassink TH, Wijsman EM, Betancur C, Buxbaum JD, Cook EH, Gallagher L, Gill M, Hallmayer J, Paterson AD, Sutcliffe JS, Szatmari P, Vieland VJ, Hakonarson H, Devlin B. (2012) Individual common variants exert weak effects on the risk for autism spectrum disorders. Hum Mol Genet. [Epub ahead of print]
- Miura K, Mainen ZF, Uchida N (2012) Odor Representations in Olfactory Cortex: Distributed Rate Coding and Decorrelated Population (doi:10.1016/j.neuron.2012.04.021). Activity Neuron 74 (6):1087-1098
- Afonso P. Basto AP, Piedade, J, Ramalho, R, Alves S, Soares, H., Cornelis, P. Martins, C. and Leitão, A. (2012) A new cloning system based on the OprI lipoprotein for the production of recombinant bacterial cell wall-derived immunogenic formulations. J. Biotec. 157:50-63
- Chaudhury, D.*, Walsh, J.J.,*, Friedman, A.K., Juarez, B., Ku, S.M., Koo, J.W., Ferguson, D., Tsai, H., Pomeranz, L., Christoffel, D.J., Nectow, A. R., Domingos, A.I., Mazie-Robison, M., Mouzon, E., Lobo, M.K., Neve, R.L., Friedman, J.M., Russo, S.J., Deisseroth, K., Nestler, E.J., Han, M.H. *(equal contribution) (2012) Rapid regulation of depression-related behaviors by control of midbrain dopamine neuron. Nature 493 (7433):532-6
- Olivieri, D., Escalona, M., and Faro, J. (2012) Software tool for 3D Extraction of Germinal Centers. BMC Bioinformatics (in press)